##assembly #CHROM ,data .csv .h5 .ssv .tsv .txt .xls .xlsx A,C,G,T,N A01 A10 AA AA,AB,BB AA,AB,BB,AC,BC,CC AC AF ALT AMMI ARC Ability Adjust Advanced African Agree Akech Alert Allan Alternatively Altus Amah Analysis Analyze Android App Append Apply April Arbitrary Assay Attribute Automatic AxB B,C BGI BLAST BQ BTI BTRACT BXW Background Batte Bioversity Blavet Book BoxPlotter Breed Brigitte Brown Browse CET CHROM CRD CTAB Cassavabase Catalog Cite Clonal Close Compare Compose Congrats Coombes Core Cornell Creates Crop Crops Crossa Cullis Curently Custom CustomerSNPID DB DD DP DRRC DaRT Dataset Datasets Delete Delphine Deselect Designed Designer Development DiGGer Disease Diseases Documentation Dolezel Doubly-Resolvable EAT EC EST East Edit Editor Effects Error Eva Evaluation Excel F1 FAQ FOC-R1 FT FTP Facebook FacilityMarkerName FacilitySampleName Factor Factors Failed Farm Featured Filtering Finalize Fix Fixing Floats Folder Forgot Formatting Forum Fusarium GL GLE GMT GP GQ GT GWAS General Genomic Graphical H2 H3 HDF5 HQ Handbook HapMap Harvest Helena Heritability Highland Hribova Hub IGD IGD1001 IITA Identification Identifier" Image Images Index Inherits Int'l Integers Interaction Intercross International Intertek IntertekSNPID Intro Introduction Items Jan Jaroslav Jbrowse Jim Jose KASP KU Leuven Lorenzen MAD MAPQ MGIS MM MM-DD-YYYY MQ MQ0 MS Management Manual Maps March MarkerName Markerset Mating Matooke Maximum Mchare Michael Mobilizing Model Modified Moses Mueller Multiplication Multiploid Musapedia NARO NARO,IITA NBS NCBI NIRS NS National NextGenCassava Nicolas Non-negative Notice Nov Nyine ODK Odd Official Ontology Organisms P1 PAG PASS PCR PDF PL POS PQ PS PUI Palm Partners Pathogens People Permissions Pests Plate's Prediction Predictive Preliminary Prepare Profile Progress Promusa Protocols QUAL RCBD REF RMS RRC RTB Radio Reload Report Resistant Resolvable Result Results Roles Rony Row-Column S12_7926132 SB SGN SNP SNPcall SOPs SSR SampleName SampleName.LabID Saves Seedling Show Sigatoka Society Southgreen Specialty Species Split Stability Starting Strings Strip Subplots Success Suffix Swahili Swennend TV Tassel Team Telomeres Tools Topics Toronto Trailing Trait Traits Transaction" Transplanting Tropical Tuesday Tutorial Twitter ULIZA URL Uganda Ugandan Ugandans Uniform User Uwimana VCF Validation Vanrespaille Vendor Venue Video View Viljoen Violet WAT Webinar Wednesday Westcott Wizard XLS XLSX Xallele Xvalue YYYY YYYY-MM-DD Yallele Yvalue Zoom abbreviation absence absent accept accessible accession .accession code. .accession names. .accession number. .accession required. accession_name accession_synonym1,accession_synonym001 accessions .accessions cross unique ids family names. .accessions list. .accessions optional. accordance account acquisition .acquisition date. activate acuminata add .add accessions. .add crossing information. .add facility identifiers. .add field. .add field management factor. .add new. .add phenotypes. .add seedlots. add-on added .added accessions. .added accessions optional. .added successfully. adding .adding accessions. .adding new. .adding new accessions. .adding new seedlots. .adding plant entries. .adding seedlots. addition additional .additional cross. .additional marker. .additional marker info. .additional notes. .additional optional fields. .additional parent info. address adheres .adjust case. administrators .advanced yield trial. agreement aim al albeit align allele .allele separated. .allele values. alleles allowed allowing alpha .alpha alpha lattice design. .alpha lattice. alphanumeric .alt alleles. alternate .alternate allele. alternative amount .amount number. analysable analyses ancestral .android application. .android application file. .android coordinate application. angle-brackets annealing_temperature application applied approve .arc augmented row-column. assembly assertion assigned assist association assumed attached augmented .augmented augmented design. .augmented design. auto-generated automatically .automatically generated. .automatically link. avoid aware backcross backcrossing banana .banana genome. .banana research. bananas .bananas project. barcode .barcode label. barcodes barcoding base bases basic .basic information. belong belongs biallelic bias biological .biological status. biparental .biparental crosses. blank block .block numbers e.g. .block sequence. .block size. .block size required. block_number blocking blocks bock bottom box box_id box_name breakend breakends breedbase breeding .breeding objective. .breeding program. .breeding programs. .breeding trials. breeding_program browser browsers bulk bulk_open bulk_self button calculating calculation calendar call called .called genotypes. .called plate. .called range_number. calls cancer canonical careful cart case .case insensitive. cases .cassavabase webinar. categories caution cf change channel character characters .characters long. check checked checks .checks list. choose chromosome .chromosome number. .chromosome set. cigar click .click upload. clicking .clonal evaluation. clone closest code codes col col_number .col_number column number. collect .collect tissue samples. collected collecting collection .collection vials containers. colon colon-separated column .column headers. .column headers listed. .column number. .column position. columns .columns additional. .columns required. combination combinations combined .combined pollen. comma .comma separated. .comma separated list. comma-separated .comma-separated file. commas common community .compare trials. compared comparing complete .complete block. completely .completely new. complex comprised computer computing conc concatenation concentration concentrations concept conditional conditioned conduct conducted confirm conjunction consecutive consistent consists contact containers content contents contig contiguous continue control controls convention converting cookies coordinate .coordinate android application. .coordinate android application exported plate layout. copy .cornell igd. correct corrected correlation count country counts covering create .create genotyping plate. .create linkage. .create new. .create tissue sample entries. created .creates plant entries. creating cross .cross combination. .cross detail page. .cross es. .cross information. .cross required. .cross types. .cross unique. .cross unique id. .cross unique ids. cross_combination cross_type cross_unique_id crosses .crosses derived. .crosses file. crossing .crossing block. .crossing experiment. .crossing experiment detail page. .crossing experiments. .crossing information. crossing_block_trial csv .csv file. .csv file .csv. .csv formatted files. cultivation culture curator current .custom plot naming. damage damage" dashboard data .data collection. .data deposited. .data e.g. .data producers. .data template information. .data usage policy. database .database click. .database prior. date .date mm-dd-yyyy. dbSNP dealing decided default define defined .defined precisely. defining definition deletion deletions delimiters denotes depending deposit deposited depth derived describing description .description additional text. .description information. descriptions design .design parameter indicating. .design parameters. .design type. design_type designing designs desirable .desirable identifier. detail .detail page. details detected digit dihaploid .dihaploid induction. dihaploid_induction diploid diploidy direct directory disable display dna_person doi donor .donor institute. .donor pui. dosage doubled .doubled haploid. doubled_haploid doubling download .download data. .download field trial layout. downloads dropped drought .drrc doubly-resolvable row-column. due duplicate .duplicate accessions. duplicated duplicates e.g e.g. e.q .edit event. efficient elements email .email address. .email alert. emailed empty enable encapsulate encoded encouraged ensure enter .enter basic information. entire .entire database. entities entity entries .entries exist. entry entry_number environment equal equals-signs errors .errors congrats click. es estimated etiquette evaluated .evaluated e.g. event .event type. events evolution exact .exact format. examples .excel file. .excel file .xls. .excel format. exception exclude exist existing .existing accession entries. .existing metadata. exists expansion expected experiment experimental .experimental design. .experimental field trial. experiments export exported .exported tissue sample. exported_tissue_sample_name extraction .extraction free-text. .extraction method e.g. .f1 hybrid. facility .facility identifier. .facility identifiers. .facility marker names. .facility sample. .facility sample names. facility_identifier facility_identifier" facilty fail fall families family .family names. family_name .family_name required. farmers .featured publication. features female .female accession. .female parent. .female plot. .female plot plant. .female population. female_focus_trait female_parent female_source_trial field .field crossing data. .field e.g. .field management. .field management factor. .field map. .field map display. .field map generation. .field size. .field size ha. .field trial. .field trial entity. .field trial represents. .field trials. field_size .field_size field size. fieldbook fields file .file .csv. .file csv. .file format. .file format information. .file matches. files fill filter filters finished .finished sampling. .fix missing. .fix missing seedlots problem. fixed flexible floating flowers follow-up following-up food forgotten form format .format field. format' formatted .formatted files. forward_primer foster free .free text. free-text frequency fruit fruits full future fuzzy .fuzzy matches. .fuzzy search. .fuzzy searching. generally generate generated generation genetic_gain_trial genome genome_structure genomes .genomic selection. genomics genotype .genotype data. .genotype likelihoods. genotyped genotypes genotypic genotyping .genotyping data. .genotyping facility. .genotyping plate. .genotyping plate detail page. .genotyping plate layout. .genotyping plate submission form. .genotyping plate's. .genotyping plate's detail page. .genotyping plates. .genotyping project. .genotyping projects. .genotyping protocol. germplasm .germplasm storage code. giving .gl field. global globally .globally unique. good grafting_trial gram grams .graphical filtering. greater greenhouse .greenhouse undesigned nursery greenhouse. grid group grouped grouping .grouping crosses. groups grow grows .gt field. guide guided ha haploid .haploid tissue. haplotype haplotypes hapmap2 hapmap3 harvest_date .harvest_date date. harvested .hdf5 .h5. .hdf5 .h5 file. header .header facility_identifier". headers health_status_trial hectares held heterogeneous heterosis_trial heterozygote hold host house http hybrid i.e id ideally identifier identifiers ids ignore .ignore warnings. .iita banana. immediately implement important improved imputed include .include additional marker. .include facility. .include facility identifiers. .include required. included including income incorporating incorrectly .incorrectly duplicated data. .incorrectly linked. increasing increment indicating individual .individual cross. .individual female parent. .individual plant. .individual plant pollinated. .individual sample. .individual selfed. individuals induction info .info field. infomation information .information file. .inherits management factor. inoculated insect insensitive insertions instance institute .institute code. integer intend intended intention intentions interactive interested .intertek snp. .intertek snp information file. .intertek snp result grid file. interview introgression_backcross_parent introgression_chromosome introgression_end_position_bp introgression_map_version introgression_parent introgression_start_position_bp inventoried inventory .inventory process. inventory_date inventory_person irregular is_a_control .is_a_control type. is_blank issues joined .kasp data. .kasp marker information file. .kasp result file. key keys keywords lab label labels language large lattice .lattice design. .lattice lattice design. layout .layout format. lead leaders leading leaf leave .leave blank. left .left blank. length level likelihoods line link linkage linkage_group linked links list listed lists livelihoods loading local located location location_code locations locus log10-scaled login logins long lots .mad modified augmented design. male .male accession. .male plot. .male plots. .male population. male_focus_trait male_parent male_plant male_source_trial manage .manage lists. .manage trials. managed .management factor. manually map mapping marker .marker information. .marker information file. .marker names. marker_name markers match .match similar names. .match vendor project. matches matching material maternal meaning meanings measure members membership mentioned merged messages messy meta-information metadata metainformation meters method million mismatched .mismatched case. mismatches missing .missing accessions. mitochondrion mix mixed .mixed models. models modern modify moldy" monocotyledonous .mq rms mapping quality. mulitple multi-marker multicross multiple .multiple synonym matches. .multiple trial. .multiple trial designs. musa .musa acuminata genome. musabase .musabase adheres. mutation named .named accessions. names naming .ncbi taxonomy. ncbi_taxonomy_id new .new accessions. .new crossing experiment. .new list. .new seedlots. .new trial. .new user. new_trial_name news ng .ng ul. non-rectangular non-reference nonpseudoautosomal note notes null num_seed_per_plot .num_seed_per_plot number seeds. number numbering numbers .numbers e.g. numeric numerically nursery objective observation observations occupied occurs ok" open .open pollinated. .open pollinated pollen. operator_name optimized option optional .optional column. .optional columns. .optional fields. .optional values. options order ordered ordering organization organization_name organizations origin .origin material. original originate originated outdated oversaw p-rep .p-rep partially replicated. package packet packets padding .padding base. page pairing parameter parameters parent .parent names. parentage parents parsing partially .partially replicated. .partially replicated design. passed password paternal patterns .pcr product. peer perform .perform crosses. performance performed permitted person phase .phase set. phased .phased genotypes. .phased set. phasing .phasing quality. phenotypes phenotypic .phenotypic data. phenotyping .phenotyping trial. phenotyping_trial phred phred-scaled .phred-scaled genotype. physical picked pipe place plan planned plant .plant e.g. .plant entries. .plant level. .plant names. plantain planted .planted seed originated. plantgenome2017.10.0090 planting .planting date. planting_date .planting_date date. plants .plants derived. plate .plate e.g. .plate id. .plate layout. plate_id plate_name plated plates platform ploidy ploidy_level plot .plot layout. .plot length. .plot names. .plot numbers. .plot plant. .plot width. plot_length .plot_length plot length. plot_name plot_name,accession_name,plot_number,block_number,is_a_control,rep_number,range_number,row_number,col_number,seedlot_name,num_seed_per_plot,weight_gram_seed_per_plot,entry_number plot_name,cross_unique_id,plot_number,block_number,is_a_control,rep_number,range_number,row_number,col_number,seedlot_name,num_seed_per_plot,weight_gram_seed_per_plot,entry_number plot_name,family_name,plot_number,block_number,is_a_control,rep_number,range_number,row_number,col_number,seedlot_name,num_seed_per_plot,weight_gram_seed_per_plot,entry_number plot_names plot_number plot_width .plot_width plot width. plots pm point pointing policy pollen pollinated .pollinated individual plant. pollination .pollination date. pollinations polycross polymorphism pop1 pop2 pop3 popular population .population stock type. population_name populations portal .pos field. position positions posterior pre-existing pre-publication preceded preceding precisely prefer prefix prefixes .preliminary yield trial. prepared prepublication .prepublication data release. presence present preserve .preserve case. prevent .prevent uploading. previous .previous field trial. previously primary print .print barcodes. prior prob probabilities probability problem problems proceed process processing produce produced producers product .product profiles. .product sizes generated. product_sizes profiles progenies progeny program programs project projects promising properties protocol provide .provide information. providing .ps field. public .public datasets. .public lists. publication publications purpose q10 qualities quality randomization randomized range range_number .range_number range number. raw .raw data. .rcbd randomized complete block design. read reads reason receipt reciprocal recommended record .record exact cross. .record plant level observations. records red .red box. redo reducing reduction refer reference .reference allele. .reference genome. refers reflect reflected regular .regular search. related .related family. .related family pollinated. relative .relative position. release released_variety_name relevant .relevant information. .reload page. rely remove rep .rep numbers e.g. rep_number .rep_number replicate number. replace replaced replacement replicate replicated .replicated accessions. .replicated treatments. replicates replication represent represented representing represents reps require required .required columns. .required fields. requirements requires requiring research .research program. resequencing reserve reserved reset resistance resolved respect respective retrieve reverse_primer review root rounded row .row header. .row number. .row position. row_number .row_number row number. rows .rows required. .rrc resolvable row-column. rs s01 s02 s50 sample .sample e.g. .sample id. .sample ids. .sample names. .sample unit. sample_A sample_B sample_C sample_id sample_name samples sampling save saved .saved successfully. scan science scientific score screen .screen house. search .search plots plants. .search results. searching section security seed .seed lots. .seed multiplication. .seed source. seed_id seedlot .seedlot detail page. .seedlot file. .seedlot inventory. .seedlot inventory file. .seedlot mentioned. seedlot_name seedlots .seedlots represent physical seed. seeds select .select coordinate csv file. .select intertek snp. .select kasp. selectbox selected .selected accessions. .selected column. selecting selection selfed semi-colon .semi-colon separated list. semi-colons .semi-colons permitted. semicolon-separated .semicolon-separated file. sensitive separate .separate entities. .separate entity. .separate plots. separated .separated list. separating separator separators sequence sequence_motif sequence_source sequential .sequential number. series serpentine set shape sharing short shorthand sib similar .similar names. similis simple simply single .single trial. .single trial design. site site's sites size sizes skip slower software somatic sordidus sorted source .source material. .source observation unit. source_observation_unit_name .specialty trial. species_name specific .specific female. .specific location. specifies splitplot .splitplot split plot. spreadsheet .spreadsheet format. .ssr data. .ssr marker info. .ssr protocol. standard standards start state statistical statistics status stem step stock .stock type. stocks storage storage_trial store stored strand strictly string stripplot structure sub-block .sub-block sequence. sub-blocking sub-field sub-fields subfield subject submission submit submitting subplot substitutions successfully sum supply support supported .supported file types ms excel. sustainable symbol symbolic synonym synonymous synonyms tab tab-delimited .tab-delimited file. tag .tassel hdf5. taxonomy template .template information. test tested tetraploid text time timeline times .times replicated accessions. timestamp tissue .tissue sample. .tissue sample entries. .tissue sample names. .tissue samples. .tissue sampling. .tissue type. tissue_id tissue_sample_name tissue_sample_names tissue_type tool .tools processing vcf files. .toronto agreement. total .total number. track tracking transaction transferred transgenic transparent transplanting_date treatment .treatment columns additional column. .treatment e.g. treatments trial .trial accession. .trial cross unique id. .trial designs. .trial detail page. .trial e.g. .trial family. .trial file. .trial following-up. .trial information. .trial layout. .trial linkage. .trial linked. .trial metadata. .trial spreadsheet. .trial type. .trial upload error messages. trial-level .trial-level entry number assigned. trial_name trial_name,breeding_program,location,year,transplanting_date,design_type,description,trial_type,plot_width,plot_length,field_size,planting_date,harvest_date,plot_name,accession_name,plot_number,block_number,is_a_control,rep_number,range_number,row_number,col_number,seedlot_name,num_seed_per_plot,weight_gram_seed_per_plot,entry_number trial_type triallelic trials .trials e.g. triple triploid trouble tuber turn tutorials .tutorials sgn. type types typically ul ultimately uncertain unchanged undesigned .uniform yield trial. unique .unique identifier. .unique tissue sample. uniquenames unit units unknown .unknown male parent. .unknown members. unphased unreplicated .unreplicated accession. .unreplicated accessions. unsure update updated updating upgrade upload .upload accessions. .upload crosses. .upload error messages. .upload excel file. .upload file. .upload genotypes. .upload seedlot inventory. .upload seedlots. .upload ssr. .upload ssr marker info. .upload template. .upload template information. .upload trial. .upload trial metadata. .upload vcf. uploaded .uploaded successfully. uploading .uploading genotyping. .uploading genotyping data. upstream usage username users utilizing valid validate validated values .values include. .values include crd completely randomized design. .values include seedling nursery. variant variety .variety release trial. .vcf file. .vcf format. version vials videos .view public. viewing vol volume warning warnings web .web url. website weight weight_gram .weight_gram weight. weight_gram_seed_per_plot .weight_gram_seed_per_plot weight. well_01A well_A01 wells .westcott westcott design. white-space whitespace width words work workflow working works workshop write wrong www www.austatgen.org year yield .yield trial. .yyyy-mm-dd format.