##assembly #CHROM ,data .csv .h5 .ssv .tsv .txt .xls .xlsx A,C,G,T,N A01 A10 AA AA,AB,BB AA,AB,BB,AC,BC,CC AC AF AMMI ARC Abolore Activity Adjust Advanced Africa African Agree Agreement Agriculture Agyemang Alert Alfred Alternatively Analysis Analyze Android Ann App Append Apply Arbitrary Asante Assay Attribute Automatic AxB B,C BGI BLAST BQ BTI Background Bela Bello Blay Book Booth BoxPlotter Boyce Breeder Brown Browse CAS CET CHROM CRD CTAB Carpio Cassav CassavaCyc Cassavabiotech.org Cassavagenome.org Catalog Chiedozie China Cite Clonal Clones Close College Compare Compose Congrats Coombes Core Cornell Creates Crops Cullis Curently Custom CustomerSNPID DB DD DNA DOE DP DRRC DaRT Danquah Datasets Del Delete Department Descriptors Deselect Designed Designer DiGGer Diagonal Discussion Disease Documentation Doubly-Resolvable Drone Dunia EAT EC EST Economic Edit Egesi Elizabeth Energy Eric Errata Error Essie Esuma Evaluation Excel Exhibition Ezenwaka F1 FAQ FT FTP FacilityMarkerName FacilitySampleName Factor Factors Failed Farmers Featured Fieldbook Filtering Finalize Fix Fixing Floats Folder Forgot Formatting Forum G3,October GBS GCP GCP21 GGE GL GLE GMT GOBii GP GQ GT GWAS GatesNotes General Genomes Genomic Graphical Green H2 H3 HDF5 HQ HTPG Hale Haleegoah Hall HapMap Harvest Harvesting Heritability High Historical Holger House IGD IGD1001 IITA ISTRC I\ Identification Identifier" Image Imagery Images Impact Implications Inbreeding Index Inherits Int'l Integers Integrated Intercross International Intertek IntertekSNPID Intro Introduction Isaac Ismail Items JGI Jan Jannink Jbrowse Jean-Luc Joint Joyce K-Means KASP Kawuki Kayondo Kinship Kirscht Kulakow Life Login Lozano Lydia MAD MAPQ MM MM-DD-YYYY MQ MQ0 MS Madu Makerere Manihot Maps March MarkerName Markerset Marnin Mating Maximum Meeting Men Mirror Mite Model Modified Mueller Multiplication NARO,IITA NCBI NIRS NRCRI NS NaCRRI National Net NextGen NextGenCassava Nigeria Non-negative Notice Nov Oct Odd Official Oladejo Olamide Olaosebikan Ontology Optimization Organisms Ozimati P1 PAG PASS PCA PCR PL POS PQ PS PUI Palm Parkes Partners Partnership Permissions Peter Pino Plate's Prediction Preferences Preliminary Prepare Profile Progress QC QUAL RCBD RIKEN RMS RRC RTB Rabbi Reload Report Reports Resolvable Resources Result Results Robert Roberto Roles Row-Column Run S12_7926132 SB SGN SNP SNPcall SOPs SSR SampleName SampleName.LabID Saves Science,September Sciences Seedling Sequencing Shanghai Show Siraj Slides Society Specialty Species Split Stability Starting Stats Streak Strings Strip Subplots Success Suffix Tassel Team Teeken Telomeres Tessy Thompson Throughput Tools Toronto Trailing Training Trait Transaction" Transplanting Tuesday Tufan Tutorials URDD URL USA Uganda Un-Replicated Uniform University User VCF VIGS Validation Vendor Venue View Village WAT WCRTC Webinar Wednesday Weed West Westcott Wiki Williams Wizard Wolfe Women XLS XLSX Xallele Xvalue YYYY YYYY-MM-DD Yallele Yvalue Zoom abbreviation absence absent accept accessible accession .accession code. .accession names. .accession number. .accession required. accession_name accession_synonym1,accession_synonym001 accessions .accessions cross unique ids family names. .accessions list. .accessions optional. accordance account acquisition .acquisition date. activate add .add accessions. .add crossing information. .add facility identifiers. .add field. .add field management factor. .add new. .add phenotypes. .add seedlots. add-on added .added accessions. .added accessions optional. .added successfully. adding .adding accessions. .adding new. .adding new accessions. .adding new seedlots. .adding plant entries. .adding seedlots. addition additional .additional cross. .additional marker. .additional marker info. .additional notes. .additional optional fields. .additional parent info. address adheres .adjust case. administrators .advanced yield trial. aim al albeit align allele .allele separated. .allele values. alleles allowed allowing alpha .alpha alpha lattice design. .alpha lattice. alphanumeric alt .alt alleles. alternate .alternate allele. alternative amount .amount number. analysable analyses ancestral .android application. .android application file. .android coordinate application. angle-brackets annealing_temperature annotations application applied approve .arc augmented row-column. assembly assertion assigned assist association assumed attached attention augmented .augmented augmented design. .augmented design. auto-generated automatically .automatically generated. .automatically link. avoid aware backcross backcrossing barcode .barcode label. barcodes barcoding base bases basic .basic information. belong belongs biallelic bias biological .biological status. biparental .biparental crosses. blank block .block numbers e.g. .block sequence. .block size. .block size required. block_number blocking blocks bock botany,July bottom box box_id box_name .boyce thompson institute. breakend breakends breedbase breeding .breeding objective. .breeding program. .breeding programs. breeding_program bringing browser browsers bulk bulk_open bulk_self button calculating calculation calendar call called .called genotypes. .called plate. .called range_number. calls calories cancer canonical careful cart case .case insensitive. cases cassava .cassava breeding. .cassava trait. cassava-discussion cassavabase .cassavabase adheres. .cassavabase webinar. cassavabase.org categories caution central century cf change character characters .characters long. check checked checks .checks list. .chiedozie egesi. choose chromosome .chromosome number. .chromosome set. cigar click .click upload. clicking .clonal evaluation. clone closest clustering code codes col col_number .col_number column number. collect .collect tissue samples. collected collecting collection .collection vials containers. colon colon-separated column .column headers. .column headers listed. .column number. .column position. columns .columns additional. .columns required. combination combinations combined .combined pollen. comma .comma separated. .comma separated list. comma-separated .comma-separated file. commas common community compared comparing complete .complete block. completely .completely new. complex comprised computer computing conc concatenation concentration concentrations concept conditional conditioned conduct conducted conferences confirm conjunction consecutive consistent consists constructs consumed contact containers content contents contig contiguous continent continue control controls convention converting cookies coordinate .coordinate android application. .coordinate android application exported plate layout. copy .cornell igd. correct corrected correlation count country counts courses covering create .create genotyping plate. .create linkage. .create new. .create tissue sample entries. created .creates plant entries. creating crop cropsci2018.01.0024 cross .cross combination. .cross detail page. .cross es. .cross information. .cross required. .cross types. .cross unique. .cross unique id. .cross unique ids. cross_combination cross_type cross_unique_id crosses .crosses derived. .crosses file. crossing .crossing block. .crossing experiment. .crossing experiment detail page. .crossing experiments. .crossing information. crossing_block_trial crossings csv .csv file. .csv file .csv. .csv formatted files. cultivated culture curator current .custom plot naming. damage damage" data .data deposited. .data e.g. .data producers. .data template information. .data usage policy. database .database click. .database prior. dataset date .date mm-dd-yyyy. dbSNP dealing decided default define defined .defined precisely. defining definition deletion deletions delimiters demo denotes depending depends deposit deposited depth derived describing description .description additional text. .description information. descriptions design .design parameter indicating. .design parameters. .design type. design_type designing designs desirable .desirable identifier. detail .detail page. details detected development digit dihaploid .dihaploid induction. dihaploid_induction diploid diploidy direct directory disable display diversity dna_person documents doi doi.org donor .donor institute. .donor pui. dosage doubled .doubled haploid. doubled_haploid doubling download .download field trial layout. downloads dropped drought .drrc doubly-resolvable row-column. due duplicate .duplicate accessions. duplicated duplicates e.g e.g. e.q .edit event. efficient elements email .email address. .email alert. emailed empty enable encapsulate encoded encouraged ensure enter .enter basic information. entire .entire database. entities entity entries .entries exist. entry entry_number environment equal equals-signs errors .errors congrats click. es esculenta estimated etiquette evaluated .evaluated e.g. event .event type. events exact .exact format. examples .excel file. .excel file .xls. .excel format. exception exclude exist existing .existing accession entries. .existing metadata. exists expansion expected experiment experimental .experimental design. .experimental field trial. experiments export exported .exported tissue sample. exported_tissue_sample_name extraction .extraction free-text. .extraction method e.g. .f1 hybrid. facility .facility identifier. .facility identifiers. .facility marker names. .facility sample. .facility sample names. facility_identifier facility_identifier" facilty fail fall fall-back families family .family names. family_name .family_name required. famine .featured publication. features feed female .female accession. .female parent. .female plot. .female plot plant. .female population. female_focus_trait female_parent female_source_trial field .field crossing data. .field e.g. .field management. .field management factor. .field map. .field map display. .field map generation. .field size. .field size ha. .field trial. .field trial entity. .field trial represents. .field trials. field_size .field_size field size. fields file .file .csv. .file csv. .file format. .file format information. .file matches. files fill filter filters finished .finished sampling. .fix missing. .fix missing seedlots problem. fixed flexible floating flowers follow-up following-up food .food security. forgotten form format .format field. format' formatted .formatted files. forward_primer foster free .free text. free-text frequency fruit fruits full .full potential. future fuzzy .fuzzy matches. .fuzzy search. .fuzzy searching. g3.118.200710 gametophype .gbs map. generally generate generated generation genetic genetic_gain_trial genetics genome genome_structure genomev6.1 .genomic selection. genomics genotype .genotype data. .genotype likelihoods. genotyped genotypes genotypic genotyping .genotyping data. .genotyping facility. .genotyping plate. .genotyping plate detail page. .genotyping plate layout. .genotyping plate submission form. .genotyping plate's. .genotyping plate's detail page. .genotyping plates. .genotyping project. .genotyping projects. .genotyping protocol. .genotyping protocols. germplasm .germplasm storage code. giving .gl field. global globally .globally unique. globe good grafting_trial gram grams greater greenhouse .greenhouse undesigned nursery greenhouse. grid ground group grouped grouping .grouping crosses. groups grow grows .gt field. guide guided ha haploid .haploid tissue. haplotype haplotypes hapmap2 hapmap3 hardy harvest_date .harvest_date date. harvested .hdf5 .h5. .hdf5 .h5 file. header .header facility_identifier". headers health_status_trial hectares held heterogeneous heterosis_trial heterozygote host http https hybrid hybridization i.e id ideally identifier identifiers ids ignore .ignore warnings. immediately implement importance important improvement imputed include .include additional marker. .include facility. .include facility identifiers. .include required. included including incorporating incorrectly .incorrectly duplicated data. .incorrectly linked. increase increasing increment indicating indispensable individual .individual cross. .individual female parent. .individual plant. .individual plant pollinated. .individual sample. .individual selfed. individuals induction info .info field. infomation information .information file. .inherits management factor. inoculated insect insensitive insertions instance institute .institute code. integer intend intended intention intentions interested .intertek snp. .intertek snp information file. .intertek snp result grid file. introgression_backcross_parent introgression_chromosome introgression_end_position_bp introgression_map_version introgression_parent introgression_start_position_bp inventoried inventory .inventory process. inventory_date inventory_person inverted irregular is_a_control .is_a_control type. is_blank .ismail rabbi. issue issues .jean-luc jannink. joined .kasp data. .kasp marker information file. .kasp result file. key keys keywords lab label labels language large largely lattice .lattice design. .lattice lattice design. layout .layout format. lead leading leaf leave .leave blank. left .left blank. length level lies likelihoods line link linkage linkage_group linked links list listed lists livelihoods lives loading local locally located location location_code locations locus log10-scaled logins long lots .mad modified augmented design. mailing .mailing list. main maize major male .male accession. .male plot. .male plots. .male population. male_focus_trait male_parent male_plant male_source_trial manage .manage lists. managed management .management factor. manager manual manually map mapping marker .marker information. .marker information file. .marker names. marker_name markers match .match similar names. .match vendor project. matches matching material .material type. materials maternal meaning meanings measure members membership mentioned merged messages messy meta-information metadata metainformation meters method million mismatched .mismatched case. mismatches missing .missing accessions. mitochondrion mix mixed .mixed models. models modern modify moldy" molecular mpact .mq rms mapping quality. mulitple multi-marker multicross multiple .multiple synonym matches. .multiple trial. .multiple trial designs. mutation named .named accessions. names naming .ncbi taxonomy. ncbi_taxonomy_id new .new accessions. .new crossing experiment. .new list. .new seedlots. .new trial. .new user. new_trial_name news .nextgen cassava. ng .ng ul. non-rectangular non-reference nonpseudoautosomal note notes null num_seed_per_plot .num_seed_per_plot number seeds. number numbering numbers .numbers e.g. numeric numerically nursery objective observation observations occupied occurs ok" open .open pollinated. .open pollinated pollen. operator_name optimized option optional .optional column. .optional columns. .optional fields. .optional values. options order ordered ordering organization organization_name organizations origin .origin material. original originate originated outdated oversaw p-rep .p-rep partially replicated. package packet packets padding .padding base. .pag meeting. page pairing parameter parameters parent .parent names. parentage parents parsing partially .partially replicated. .partially replicated design. passed password paternal patterns .pcr product. peer people perform .perform crosses. performance performed permitted person pest .peter kulakow. phase .phase set. phased .phased genotypes. .phased set. phasing .phasing quality. phenotypes phenotypic phenotyping .phenotyping trial. phenotyping_trial phred phred-scaled .phred-scaled genotype. physical picked pipe place plan planned plant .plant e.g. .plant entries. .plant level. .plant material. .plant materials. .plant names. planted .planted seed originated. planting .planting date. planting_date .planting_date date. plants .plants derived. plate .plate e.g. .plate id. .plate layout. plate_id plate_name plated plates platform ploidy ploidy_level plot .plot layout. .plot length. .plot names. .plot numbers. .plot plant. .plot width. plot_length .plot_length plot length. plot_name plot_name,accession_name,plot_number,block_number,is_a_control,rep_number,range_number,row_number,col_number,seedlot_name,num_seed_per_plot,weight_gram_seed_per_plot,entry_number plot_name,cross_unique_id,plot_number,block_number,is_a_control,rep_number,range_number,row_number,col_number,seedlot_name,num_seed_per_plot,weight_gram_seed_per_plot,entry_number plot_name,family_name,plot_number,block_number,is_a_control,rep_number,range_number,row_number,col_number,seedlot_name,num_seed_per_plot,weight_gram_seed_per_plot,entry_number plot_names plot_number plot_width .plot_width plot width. plots pm point pointing policy pollen pollinated .pollinated individual plant. pollination .pollination date. pollinations polycross polymorphism pop1 pop2 pop3 popular population .population stock type. .population structure. population_name populations .pos field. position positions posterior potential powered pre-existing pre-publication preceded preceding precisely prefer preferred prefix prefixes .preliminary yield trial. prepared prepublication .prepublication data release. presence present preserve .preserve case. prevent .prevent uploading. previous .previous field trial. previously primary print .print barcodes. prior prob probabilities probability problem problems proceed process processing produce produced producers product .product profiles. .product sizes generated. product_profile product_sizes profiles progenies progeny program programs project projects promises promising properties protocol protocols provide .provide information. providing .ps field. public .public datasets. .public lists. publication publications purpose q10 qualities quality .quality control. questions randomization randomized range range_number .range_number range number. rate raw .raw data. .rcbd randomized complete block design. re-download read reads reason receipt received reciprocal recommend recommended record .record exact cross. .record plant level observations. records red .red box. redo reducing reduction ref refer reference .reference allele. .reference genome. refers reflect reflected regular .regular search. related .related family. .related family pollinated. relative .relative position. release released_variety_name relevant .relevant information. .reload page. rely remove rep .rep numbers e.g. rep_number .rep_number replicate number. replace replaced replacement replicate replicated .replicated accessions. .replicated treatments. replicates replication represent represented representing represents reps require required .required columns. .required fields. requirements requires requiring research .research institute. reserve reserved reset resistance resolved respect respective retrieve reveals reverse_primer review rice root .root crops. rounded row .row header. .row number. .row position. row_number .row_number row number. rows .rows required. .rrc resolvable row-column. rs s01 s02 s12231-018-9421-7 s50 sample .sample e.g. .sample id. .sample ids. .sample names. .sample unit. sample_A sample_B sample_C sample_id sample_name samples sampling save saved .saved successfully. scan scientific score screen .screen house. search .search plots plants. .search results. searching section security seed .seed lots. .seed multiplication. .seed source. seed_id seedlot .seedlot detail page. .seedlot file. .seedlot inventory. .seedlot inventory file. .seedlot mentioned. seedlot_name seedlots .seedlots represent physical. seeds select .select coordinate csv file. .select intertek snp. .select kasp. selectbox selected .selected accessions. .selected column. selecting selection selfed semi-colon .semi-colon separated list. semi-colons .semi-colons permitted. semicolon-separated .semicolon-separated file. sensitive separate .separate entities. .separate entity. .separate plots. separated .separated list. separating separator separators sequence sequence_motif sequence_source sequential .sequential number. series serpentine set shape sharing short shorthand sib similar .similar names. simple simply single .single trial. .single trial design. site site's sites size sizes skip slideshare slower software solgs somatic sorted source .source material. .source observation unit. source_observation_unit_name .specialty trial. species_name specific .specific female. .specific location. specifies splitplot .splitplot split plot. spreadsheet .spreadsheet format. .ssr data. .ssr marker info. .ssr protocol. standard standards staple .staple crop. staples start state statistical status stem step stock .stock type. stocks storage storage_trial store stored strand strictly string stripplot structure sub-block .sub-block sequence. sub-blocking sub-field sub-fields subfield subject submission submit submitting subplot subscribe substantially substitutions successfully sum supply support supported .supported file types ms excel. symbol symbolic synonym synonymous synonyms tab tab-delimited .tab-delimited file. tag .tassel hdf5. taxonomy template .template information. test tested tetraploid text time timeline times .times replicated accessions. timestamp tissue .tissue sample. .tissue sample entries. .tissue sample names. .tissue samples. .tissue sampling. .tissue type. tissue_id tissue_sample_name tissue_sample_names tissue_type tool .tools processing vcf files. .toronto agreement. total .total number. track traits transaction transferred transgenic transparent transplanting_date treatment .treatment columns additional column. .treatment e.g. treatments trial .trial accession. .trial cross unique id. .trial designs. .trial detail page. .trial e.g. .trial family. .trial file. .trial following-up. .trial information. .trial layout. .trial linkage. .trial linked. .trial metadata. .trial spreadsheet. .trial type. .trial upload error messages. trial-level .trial-level entry number assigned. trial_name trial_name,breeding_program,location,year,transplanting_date,design_type,description,trial_type,plot_width,plot_length,field_size,planting_date,harvest_date,plot_name,accession_name,plot_number,block_number,is_a_control,rep_number,range_number,row_number,col_number,seedlot_name,num_seed_per_plot,weight_gram_seed_per_plot,entry_number trial_type triallelic trials .trials e.g. triple triploid tropical trouble tuber turn tutorial type types typically ul ultimately uncertain unchanged undesigned .uniform yield trial. unique .unique identifier. .unique tissue sample. uniquenames unit units unknown .unknown male parent. .unknown members. unlock unlocking unphased unreplicated .unreplicated accession. .unreplicated accessions. unsure update updated updating upgrade upload .upload crosses. .upload error messages. .upload excel file. .upload file. .upload genotypes. .upload seedlot inventory. .upload seedlots. .upload ssr. .upload ssr marker info. .upload template. .upload template information. .upload trial. .upload trial metadata. .upload vcf. uploaded .uploaded successfully. uploading .uploading genotyping. .uploading genotyping data. .uploading seedlots. upstream .urdd un-replicated diagonal design. usage username users utilizing v6.1 valid validate validated values .values include. .values include crd completely randomized design. .values include seedling nursery. variant variety .variety release trial. variety_release_id .vcf file. .vcf format. version vials video .view public. viewing vol volume warning warnings web .web url. website weight weight_gram .weight_gram weight. weight_gram_seed_per_plot .weight_gram_seed_per_plot weight. well_01A well_A01 wells .westcott westcott design. wheat white-space whitespace widely width wild words work workflow working works workshop write wrong www www.austatgen.org year year_of_cloning yield .yield trial. .yyyy-mm-dd format.